Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.06□□□□□ -0.8
H2afjQ8R1M2 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
H2afjQ8R1M2 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Gm15432-201ENSMUST00000121106 195 ntBASIC10.05□□□□□ -0.8
H2afjQ8R1M2 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Gm4726-201ENSMUST00000135604 736 ntBASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Gm6019-201ENSMUST00000148369 736 ntBASIC10.05□□□□□ -0.8
H2afjQ8R1M2 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Gm38321-201ENSMUST00000195053 235 ntBASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Mir7686-201ENSMUST00000200604 57 ntBASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Gm5302-201ENSMUST00000202130 796 ntBASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.05□□□□□ -0.8
H2afjQ8R1M2 AC137950.2-201ENSMUST00000227127 1089 ntBASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H2afjQ8R1M2 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Gm25226-201ENSMUST00000158198 123 ntBASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.04□□□□□ -0.8
H2afjQ8R1M2 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H2afjQ8R1M2 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms