Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm37284-201ENSMUST00000193607 539 ntBASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup88Q8CEC0 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.8□□□□□ -0.36
Nup88Q8CEC0 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Gm37301-201ENSMUST00000195412 568 ntBASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.8□□□□□ -0.36
Nup88Q8CEC0 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup88Q8CEC0 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Gm22379-201ENSMUST00000157480 131 ntBASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Gm23694-201ENSMUST00000179335 110 ntBASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Gm18463-201ENSMUST00000207258 474 ntBASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Gm18460-201ENSMUST00000208088 464 ntBASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Gm18968-201ENSMUST00000221319 862 ntBASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.79□□□□□ -0.36
Nup88Q8CEC0 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup88Q8CEC0 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.78□□□□□ -0.36
Nup88Q8CEC0 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms