Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm19009-201ENSMUST00000223072 823 ntBASIC11.16□□□□□ -0.62
Trub1Q8C0D0 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.16□□□□□ -0.62
Trub1Q8C0D0 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trub1Q8C0D0 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.15□□□□□ -0.62
Trub1Q8C0D0 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Gm14270-201ENSMUST00000118388 846 ntBASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Gm16030-201ENSMUST00000159098 603 ntBASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Gm8365-201ENSMUST00000197334 648 ntBASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Gm12097-201ENSMUST00000121523 1414 ntBASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trub1Q8C0D0 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.15□□□□□ -0.63
Trub1Q8C0D0 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trub1Q8C0D0 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trub1Q8C0D0 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trub1Q8C0D0 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Trub1Q8C0D0 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.15□□□□□ -0.63
Trub1Q8C0D0 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Gm14497-201ENSMUST00000119537 580 ntBASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Gm15554-201ENSMUST00000120406 913 ntBASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Gm9081-201ENSMUST00000182346 991 ntBASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms