Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Gm37516-201ENSMUST00000192593 1954 ntBASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Gm37390-201ENSMUST00000192452 872 ntBASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Gm44139-201ENSMUST00000204903 373 ntBASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Gm19121-201ENSMUST00000215720 1022 ntBASIC12.57□□□□□ -0.4
Nup98Q6PFD9 AC127583.1-201ENSMUST00000224351 540 ntBASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup98Q6PFD9 Gm8848-201ENSMUST00000197270 1343 ntBASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.56□□□□□ -0.4
Nup98Q6PFD9 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Gm12470-201ENSMUST00000117239 1049 ntBASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Gm6069-201ENSMUST00000196501 463 ntBASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Gm8828-201ENSMUST00000196786 1290 ntBASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Gm19798-201ENSMUST00000201502 457 ntBASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Gm18256-201ENSMUST00000209087 907 ntBASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 AC154186.1-201ENSMUST00000227711 1597 ntBASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nup98Q6PFD9 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm14853-201ENSMUST00000116081 549 ntBASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm17944-201ENSMUST00000186351 643 ntBASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm18894-201ENSMUST00000198794 694 ntBASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm8083-201ENSMUST00000203976 475 ntBASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gm7823-201ENSMUST00000120761 1623 ntBASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nup98Q6PFD9 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms