Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Srsf5-203ENSMUST00000110352 1491 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Srsf5-204ENSMUST00000110354 1489 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Magea8-201ENSMUST00000070141 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Gm5696-201ENSMUST00000189850 552 ntBASIC9.97□□□□□ -0.81
Spg11Q3UHA3 D530037P16Rik-201ENSMUST00000199255 1027 ntBASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Npy-201ENSMUST00000031843 566 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 n-R5s5-201ENSMUST00000083134 119 ntBASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Gm13169-201ENSMUST00000122090 1459 ntBASIC9.97□□□□□ -0.81
Spg11Q3UHA3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Cct7-203ENSMUST00000204592 1544 ntTSL 5 BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Myc-207ENSMUST00000188482 1365 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Spg11Q3UHA3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 AC130671.3-201ENSMUST00000227393 1897 ntBASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Trex1-202ENSMUST00000112053 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Gm11700-201ENSMUST00000119409 403 ntBASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Smarce1-ps1-201ENSMUST00000180067 1077 ntBASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Platr11-201ENSMUST00000182885 388 ntTSL 3 BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Gm10318-201ENSMUST00000186874 930 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 E330011O21Rik-201ENSMUST00000209468 1107 ntTSL 5 BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Spg11Q3UHA3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Gm8684-201ENSMUST00000195078 1564 ntBASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Gm12817-201ENSMUST00000119622 610 ntBASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Gm7847-201ENSMUST00000151645 777 ntBASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Gm24346-201ENSMUST00000158712 194 ntBASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Gm17228-201ENSMUST00000165006 491 ntBASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Gm9515-201ENSMUST00000200276 647 ntBASIC9.96□□□□□ -0.82
Spg11Q3UHA3 AC162893.1-201ENSMUST00000207732 1085 ntBASIC9.96□□□□□ -0.82
Spg11Q3UHA3 AC123692.1-201ENSMUST00000227514 730 ntBASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
Spg11Q3UHA3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms