Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm37859-201ENSMUST00000195529 2173 ntBASIC8.42□□□□□ -1.06
Cdx4Q07424 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm26134-201ENSMUST00000178484 110 ntBASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm7593-201ENSMUST00000187246 644 ntBASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm37826-201ENSMUST00000195329 322 ntBASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm3793-201ENSMUST00000204973 672 ntBASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm19091-201ENSMUST00000208120 978 ntBASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm5468-202ENSMUST00000227851 682 ntBASIC8.42□□□□□ -1.06
Cdx4Q07424 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm9415-201ENSMUST00000200462 1321 ntBASIC8.42□□□□□ -1.06
Cdx4Q07424 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Adgrv1-214ENSMUST00000224088 1492 ntBASIC8.42□□□□□ -1.06
Cdx4Q07424 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm18798-201ENSMUST00000187264 1700 ntBASIC8.42□□□□□ -1.06
Cdx4Q07424 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC8.42□□□□□ -1.06
Cdx4Q07424 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
Cdx4Q07424 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC8.42□□□□□ -1.06
Cdx4Q07424 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Cdx4Q07424 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cdx4Q07424 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Cdx4Q07424 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm44663-201ENSMUST00000206898 3150 ntBASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Cdx4Q07424 Nudt13-207ENSMUST00000224311 1574 ntBASIC8.41□□□□□ -1.06
Cdx4Q07424 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Cdx4Q07424 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Cdx4Q07424 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC8.41□□□□□ -1.06
Cdx4Q07424 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm14807-201ENSMUST00000116640 983 ntBASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm13422-201ENSMUST00000118834 504 ntBASIC8.41□□□□□ -1.06
Cdx4Q07424 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC8.41□□□□□ -1.06
Cdx4Q07424 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cdx4Q07424 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC8.41□□□□□ -1.06
Cdx4Q07424 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC8.41□□□□□ -1.06
Cdx4Q07424 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm37458-201ENSMUST00000194055 410 ntBASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm9353-201ENSMUST00000200472 604 ntBASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm43371-201ENSMUST00000202838 1031 ntBASIC8.41□□□□□ -1.06
Cdx4Q07424 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC8.41□□□□□ -1.06
Cdx4Q07424 Gm3017-201ENSMUST00000203603 1126 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms