Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
SgcbP82349 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
SgcbP82349 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
SgcbP82349 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.78□□□□□ -0.84
SgcbP82349 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SgcbP82349 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SgcbP82349 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
SgcbP82349 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
SgcbP82349 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.84
SgcbP82349 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
SgcbP82349 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
SgcbP82349 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SgcbP82349 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SgcbP82349 Cgnl1-201ENSMUST00000072899 6754 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.84
SgcbP82349 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.77□□□□□ -0.85
SgcbP82349 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
SgcbP82349 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC9.77□□□□□ -0.85
SgcbP82349 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.77□□□□□ -0.85
SgcbP82349 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.77□□□□□ -0.85
SgcbP82349 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.77□□□□□ -0.85
SgcbP82349 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
SgcbP82349 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 AC136019.1-201ENSMUST00000226503 1412 ntBASIC9.77□□□□□ -0.85
SgcbP82349 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC9.77□□□□□ -0.85
SgcbP82349 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
SgcbP82349 Gm22709-201ENSMUST00000116893 111 ntBASIC9.77□□□□□ -0.85
SgcbP82349 Gm9673-201ENSMUST00000119287 781 ntBASIC9.77□□□□□ -0.85
SgcbP82349 Gm11952-201ENSMUST00000121172 821 ntBASIC9.77□□□□□ -0.85
SgcbP82349 Gm12372-201ENSMUST00000121654 768 ntBASIC9.77□□□□□ -0.85
SgcbP82349 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC9.77□□□□□ -0.85
SgcbP82349 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC9.77□□□□□ -0.85
SgcbP82349 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
SgcbP82349 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC9.77□□□□□ -0.85
SgcbP82349 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Gm28833-201ENSMUST00000189671 559 ntBASIC9.77□□□□□ -0.85
SgcbP82349 Gm9116-201ENSMUST00000192400 1018 ntBASIC9.77□□□□□ -0.85
SgcbP82349 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC9.77□□□□□ -0.85
SgcbP82349 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC9.77□□□□□ -0.85
SgcbP82349 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC9.77□□□□□ -0.85
SgcbP82349 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.77□□□□□ -0.85
SgcbP82349 Gm3028-201ENSMUST00000213805 1119 ntBASIC9.77□□□□□ -0.85
SgcbP82349 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.77□□□□□ -0.85
SgcbP82349 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC9.77□□□□□ -0.85
SgcbP82349 CT025525.1-201ENSMUST00000226325 1054 ntBASIC9.77□□□□□ -0.85
SgcbP82349 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Gm5805-201ENSMUST00000072779 456 ntBASIC9.77□□□□□ -0.85
SgcbP82349 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
SgcbP82349 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
SgcbP82349 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
SgcbP82349 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
SgcbP82349 Gm43334-201ENSMUST00000197740 1318 ntBASIC9.77□□□□□ -0.85
SgcbP82349 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC9.77□□□□□ -0.85
SgcbP82349 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
SgcbP82349 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
SgcbP82349 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SgcbP82349 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
SgcbP82349 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.76□□□□□ -0.85
SgcbP82349 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.76□□□□□ -0.85
SgcbP82349 Gm42479-201ENSMUST00000198654 1356 ntBASIC9.76□□□□□ -0.85
SgcbP82349 Fhad1-203ENSMUST00000105780 4809 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
SgcbP82349 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms