Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cux2P70298 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cux2P70298 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cux2P70298 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cux2P70298 Rnf183-202ENSMUST00000107454 1407 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Cux2P70298 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cux2P70298 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cux2P70298 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cux2P70298 AC122811.1-201ENSMUST00000222257 2921 ntBASIC17.43■□□□□ 0.38
Cux2P70298 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cux2P70298 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC17.42■□□□□ 0.38
Cux2P70298 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cux2P70298 Gm13551-201ENSMUST00000121286 430 ntBASIC17.42■□□□□ 0.38
Cux2P70298 Ctdp1-203ENSMUST00000161003 1199 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cux2P70298 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cux2P70298 Smarce1-ps1-201ENSMUST00000180067 1077 ntBASIC17.42■□□□□ 0.38
Cux2P70298 Gm16008-203ENSMUST00000181389 480 ntTSL 3 BASIC17.42■□□□□ 0.38
Cux2P70298 Pea15b-202ENSMUST00000183185 555 ntBASIC17.42■□□□□ 0.38
Cux2P70298 Spin3-ps-201ENSMUST00000192825 770 ntBASIC17.42■□□□□ 0.38
Cux2P70298 Gm37232-201ENSMUST00000194887 367 ntBASIC17.42■□□□□ 0.38
Cux2P70298 Gm44155-201ENSMUST00000203923 412 ntBASIC17.42■□□□□ 0.38
Cux2P70298 Gm2981-201ENSMUST00000213947 694 ntBASIC17.42■□□□□ 0.38
Cux2P70298 Rpl14-ps1-201ENSMUST00000026901 653 ntBASIC17.42■□□□□ 0.38
Cux2P70298 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Cux2P70298 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC17.42■□□□□ 0.38
Cux2P70298 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cux2P70298 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cux2P70298 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cux2P70298 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cux2P70298 Vmn1r44-203ENSMUST00000226120 1772 ntBASIC17.42■□□□□ 0.38
Cux2P70298 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cux2P70298 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cux2P70298 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cux2P70298 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC17.42■□□□□ 0.38
Cux2P70298 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cux2P70298 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cux2P70298 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cux2P70298 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC17.41■□□□□ 0.38
Cux2P70298 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cux2P70298 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Cux2P70298 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cux2P70298 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Gm12072-201ENSMUST00000118293 715 ntBASIC17.41■□□□□ 0.38
Cux2P70298 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC17.41■□□□□ 0.38
Cux2P70298 Rbm4-201ENSMUST00000164209 801 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Gm21577-201ENSMUST00000190823 697 ntBASIC17.41■□□□□ 0.38
Cux2P70298 Gm20802-201ENSMUST00000190832 698 ntBASIC17.41■□□□□ 0.38
Cux2P70298 Gm6342-201ENSMUST00000204344 766 ntBASIC17.41■□□□□ 0.38
Cux2P70298 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC17.41■□□□□ 0.38
Cux2P70298 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC17.41■□□□□ 0.38
Cux2P70298 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Amn1-202ENSMUST00000111535 1457 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Cux2P70298 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC17.41■□□□□ 0.38
Cux2P70298 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cux2P70298 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Cux2P70298 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Cux2P70298 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cux2P70298 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cux2P70298 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cux2P70298 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC17.4■□□□□ 0.38
Cux2P70298 Gm26483-201ENSMUST00000158016 104 ntBASIC17.4■□□□□ 0.38
Cux2P70298 Airn-204ENSMUST00000160932 842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Gm5652-201ENSMUST00000182336 1008 ntBASIC17.4■□□□□ 0.38
Cux2P70298 Gm8022-201ENSMUST00000191763 904 ntBASIC17.4■□□□□ 0.38
Cux2P70298 Gm18857-201ENSMUST00000210421 901 ntBASIC17.4■□□□□ 0.38
Cux2P70298 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC17.4■□□□□ 0.38
Cux2P70298 AC100406.1-201ENSMUST00000217305 480 ntBASIC17.4■□□□□ 0.38
Cux2P70298 Gm18119-201ENSMUST00000219972 616 ntBASIC17.4■□□□□ 0.38
Cux2P70298 Cdca8-201ENSMUST00000030690 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Slc51b-201ENSMUST00000065894 709 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cux2P70298 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
Cux2P70298 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cux2P70298 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms