Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.6□□□□□ -0.39
Traf1P39428 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.6□□□□□ -0.39
Traf1P39428 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Traf1P39428 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Traf1P39428 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Traf1P39428 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Traf1P39428 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Gm12712-201ENSMUST00000120676 801 ntBASIC12.6□□□□□ -0.39
Traf1P39428 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.6□□□□□ -0.39
Traf1P39428 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.6□□□□□ -0.39
Traf1P39428 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.6□□□□□ -0.39
Traf1P39428 Gm42751-201ENSMUST00000198065 559 ntBASIC12.6□□□□□ -0.39
Traf1P39428 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.6□□□□□ -0.39
Traf1P39428 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Gm18204-201ENSMUST00000209835 793 ntBASIC12.6□□□□□ -0.39
Traf1P39428 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Traf1P39428 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.6□□□□□ -0.39
Traf1P39428 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Gm25125-201ENSMUST00000083340 136 ntBASIC12.6□□□□□ -0.39
Traf1P39428 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Traf1P39428 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Traf1P39428 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Traf1P39428 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Traf1P39428 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Traf1P39428 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Traf1P39428 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Traf1P39428 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Traf1P39428 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Traf1P39428 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.59□□□□□ -0.39
Traf1P39428 Gm11619-201ENSMUST00000117474 237 ntBASIC12.59□□□□□ -0.39
Traf1P39428 Gm11475-201ENSMUST00000118482 476 ntBASIC12.59□□□□□ -0.39
Traf1P39428 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.59□□□□□ -0.39
Traf1P39428 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.59□□□□□ -0.39
Traf1P39428 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.59□□□□□ -0.39
Traf1P39428 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.59□□□□□ -0.39
Traf1P39428 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.59□□□□□ -0.39
Traf1P39428 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Gm18733-202ENSMUST00000174447 401 ntBASIC12.59□□□□□ -0.39
Traf1P39428 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.59□□□□□ -0.39
Traf1P39428 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.59□□□□□ -0.39
Traf1P39428 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.59□□□□□ -0.39
Traf1P39428 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.59□□□□□ -0.39
Traf1P39428 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.59□□□□□ -0.39
Traf1P39428 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.59□□□□□ -0.39
Traf1P39428 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.59□□□□□ -0.39
Traf1P39428 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Traf1P39428 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.59□□□□□ -0.39
Traf1P39428 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Traf1P39428 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.59□□□□□ -0.39
Traf1P39428 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Traf1P39428 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Traf1P39428 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Traf1P39428 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms