Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Gm29410-201ENSMUST00000188383 694 ntBASIC11.83□□□□□ -0.52
Chmp6P0C0A3 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Gm39288-201ENSMUST00000210554 446 ntBASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.83□□□□□ -0.52
Chmp6P0C0A3 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.83□□□□□ -0.52
Chmp6P0C0A3 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Gm14807-201ENSMUST00000116640 983 ntBASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Gm12030-201ENSMUST00000121917 223 ntBASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Gm25554-201ENSMUST00000158075 113 ntBASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.82□□□□□ -0.52
Chmp6P0C0A3 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Gm5100-201ENSMUST00000195631 589 ntBASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Gm45219-201ENSMUST00000205602 465 ntBASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chmp6P0C0A3 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Mir453-201ENSMUST00000104732 82 ntBASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Gm22379-201ENSMUST00000157480 131 ntBASIC11.81□□□□□ -0.52
Chmp6P0C0A3 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Gm9369-201ENSMUST00000196009 733 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms