Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC13.14□□□□□ -0.31
NpcdF8VQB8 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.14□□□□□ -0.31
NpcdF8VQB8 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Gm13688-201ENSMUST00000121557 608 ntBASIC13.14□□□□□ -0.31
NpcdF8VQB8 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.14□□□□□ -0.31
NpcdF8VQB8 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Gm6859-201ENSMUST00000218614 989 ntBASIC13.14□□□□□ -0.31
NpcdF8VQB8 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Gm23458-201ENSMUST00000083257 169 ntBASIC13.14□□□□□ -0.31
NpcdF8VQB8 Gm25514-201ENSMUST00000083860 135 ntBASIC13.14□□□□□ -0.31
NpcdF8VQB8 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.14□□□□□ -0.31
NpcdF8VQB8 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Gm5472-201ENSMUST00000178604 1678 ntBASIC13.14□□□□□ -0.31
NpcdF8VQB8 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NpcdF8VQB8 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Gm20091-201ENSMUST00000179683 189 ntBASIC13.13□□□□□ -0.31
NpcdF8VQB8 Gm5311-201ENSMUST00000203518 709 ntBASIC13.13□□□□□ -0.31
NpcdF8VQB8 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.13□□□□□ -0.31
NpcdF8VQB8 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NpcdF8VQB8 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.12□□□□□ -0.31
NpcdF8VQB8 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Gm23062-201ENSMUST00000102349 110 ntBASIC13.12□□□□□ -0.31
NpcdF8VQB8 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC13.12□□□□□ -0.31
NpcdF8VQB8 Gm6038-201ENSMUST00000154310 948 ntBASIC13.12□□□□□ -0.31
NpcdF8VQB8 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.12□□□□□ -0.31
NpcdF8VQB8 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC13.12□□□□□ -0.31
NpcdF8VQB8 Gm8268-201ENSMUST00000209683 458 ntBASIC13.12□□□□□ -0.31
NpcdF8VQB8 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC13.12□□□□□ -0.31
NpcdF8VQB8 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Gm38116-201ENSMUST00000193873 1533 ntBASIC13.12□□□□□ -0.31
NpcdF8VQB8 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms