Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube4bQ9ES00 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Gm26361-201ENSMUST00000158868 186 ntBASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Gm25890-201ENSMUST00000177643 165 ntBASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Gm22614-201ENSMUST00000178300 165 ntBASIC10.37□□□□□ -0.75
Ube4bQ9ES00 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.37□□□□□ -0.75
Ube4bQ9ES00 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Gm22042-201ENSMUST00000082989 165 ntBASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Gm26110-201ENSMUST00000083971 165 ntBASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Grik1-211ENSMUST00000228188 3221 ntBASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ube4bQ9ES00 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Zfp111-201ENSMUST00000056683 3380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm38001-201ENSMUST00000192900 3761 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Xrcc2-201ENSMUST00000030773 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm29685-201ENSMUST00000219670 2365 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm25700-201ENSMUST00000177693 110 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm27627-201ENSMUST00000183644 150 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Mir6420-201ENSMUST00000185032 102 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Mir8093-201ENSMUST00000185043 137 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm28937-201ENSMUST00000185413 695 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm29400-201ENSMUST00000187208 695 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm28746-201ENSMUST00000187453 380 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm28662-201ENSMUST00000188446 695 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm28251-201ENSMUST00000188835 695 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm37318-201ENSMUST00000194325 695 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm38017-201ENSMUST00000194768 695 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm37287-201ENSMUST00000195449 695 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm37793-201ENSMUST00000195548 695 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 AY036118-201ENSMUST00000200021 923 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ube4bQ9ES00 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms