Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 AC154220.1-201ENSMUST00000225033 1705 ntBASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Gm23699-201ENSMUST00000158835 135 ntBASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Mir7051-201ENSMUST00000184167 73 ntBASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Ginm1-202ENSMUST00000065124 300 ntBASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Gm37697-201ENSMUST00000195680 1844 ntBASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Rims2-204ENSMUST00000226410 3685 ntBASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim43aQ3TL54 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Gm18367-201ENSMUST00000176139 600 ntBASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Gm3508-201ENSMUST00000186012 792 ntBASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Gm37852-201ENSMUST00000193027 350 ntBASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Gm19091-201ENSMUST00000208120 978 ntBASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Gm10020-201ENSMUST00000081993 612 ntBASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Gm21142-201ENSMUST00000179999 2604 ntBASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim43aQ3TL54 AC121870.2-201ENSMUST00000214343 1870 ntBASIC11.49□□□□□ -0.57
Trim43aQ3TL54 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
Trim43aQ3TL54 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms