Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 Gm7399-201ENSMUST00000032395 858 ntBASIC9.09□□□□□ -0.95
Npas1P97459 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Npas1P97459 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 Nrep-201ENSMUST00000051087 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Npas1P97459 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.09□□□□□ -0.95
Npas1P97459 Gm9200-201ENSMUST00000118513 1354 ntBASIC9.09□□□□□ -0.95
Npas1P97459 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC9.09□□□□□ -0.95
Npas1P97459 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC9.09□□□□□ -0.95
Npas1P97459 Manba-201ENSMUST00000029814 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Npas1P97459 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 Bcas1-203ENSMUST00000109152 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Npas1P97459 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Npas1P97459 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Radil-202ENSMUST00000085758 3714 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
Npas1P97459 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Gm28424-201ENSMUST00000187393 1319 ntBASIC9.08□□□□□ -0.96
Npas1P97459 Usp10-202ENSMUST00000108988 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 AC123534.1-202ENSMUST00000224256 1837 ntBASIC9.08□□□□□ -0.96
Npas1P97459 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Npas1P97459 Gm15947-201ENSMUST00000161395 2742 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.08□□□□□ -0.96
Npas1P97459 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.08□□□□□ -0.96
Npas1P97459 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.08□□□□□ -0.96
Npas1P97459 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC9.08□□□□□ -0.96
Npas1P97459 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.08□□□□□ -0.96
Npas1P97459 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC9.08□□□□□ -0.96
Npas1P97459 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Npas1P97459 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Npas1P97459 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC9.08□□□□□ -0.96
Npas1P97459 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC9.08□□□□□ -0.96
Npas1P97459 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.08□□□□□ -0.96
Npas1P97459 AY702102-202ENSMUST00000194651 1173 ntBASIC9.08□□□□□ -0.96
Npas1P97459 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 AC122891.1-201ENSMUST00000218671 268 ntBASIC9.08□□□□□ -0.96
Npas1P97459 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.08□□□□□ -0.96
Npas1P97459 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Gm26448-201ENSMUST00000082446 203 ntBASIC9.08□□□□□ -0.96
Npas1P97459 Gm25857-201ENSMUST00000082788 129 ntBASIC9.08□□□□□ -0.96
Npas1P97459 Gm10478-201ENSMUST00000084451 396 ntBASIC9.08□□□□□ -0.96
Npas1P97459 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Npas1P97459 AC159813.1-201ENSMUST00000222671 2263 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Sdc2-201ENSMUST00000022871 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC9.08□□□□□ -0.96
Npas1P97459 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Atxn7l1-212ENSMUST00000146040 2973 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
Npas1P97459 Olfr1395-203ENSMUST00000214195 2984 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Npas1P97459 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC9.08□□□□□ -0.96
Npas1P97459 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Npas1P97459 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Npas1P97459 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Npas1P97459 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 AC132467.2-201ENSMUST00000226306 2253 ntBASIC9.07□□□□□ -0.96
Npas1P97459 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC9.07□□□□□ -0.96
Npas1P97459 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC9.07□□□□□ -0.96
Npas1P97459 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Npas1P97459 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Npas1P97459 Gm12742-201ENSMUST00000117326 410 ntBASIC9.07□□□□□ -0.96
Npas1P97459 Gm15617-201ENSMUST00000118973 771 ntBASIC9.07□□□□□ -0.96
Npas1P97459 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms