Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CiitaP79621 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.78□□□□□ -0.52
CiitaP79621 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.78□□□□□ -0.52
CiitaP79621 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.78□□□□□ -0.52
CiitaP79621 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CiitaP79621 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
CiitaP79621 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.78□□□□□ -0.52
CiitaP79621 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CiitaP79621 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
CiitaP79621 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.77□□□□□ -0.52
CiitaP79621 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CiitaP79621 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC11.77□□□□□ -0.52
CiitaP79621 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CiitaP79621 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CiitaP79621 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CiitaP79621 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CiitaP79621 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CiitaP79621 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CiitaP79621 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.77□□□□□ -0.53
CiitaP79621 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.77□□□□□ -0.53
CiitaP79621 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CiitaP79621 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CiitaP79621 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CiitaP79621 Gm20392-201ENSMUST00000173047 701 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm23400-201ENSMUST00000174994 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm26463-201ENSMUST00000175065 101 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm24332-201ENSMUST00000175102 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm25959-201ENSMUST00000175112 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm22475-201ENSMUST00000175169 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm22903-201ENSMUST00000175193 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm25070-201ENSMUST00000175237 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm24159-201ENSMUST00000175264 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm25299-201ENSMUST00000175283 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm23798-201ENSMUST00000175560 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm23802-201ENSMUST00000175565 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm25708-201ENSMUST00000177687 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm24370-201ENSMUST00000178007 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm23049-201ENSMUST00000178068 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm28019-201ENSMUST00000178138 101 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm25571-201ENSMUST00000178322 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm25355-201ENSMUST00000178456 101 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm24975-201ENSMUST00000178492 101 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm23189-201ENSMUST00000178954 102 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm25100-201ENSMUST00000179750 101 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm23064-201ENSMUST00000179866 101 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm27440-201ENSMUST00000184785 107 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.77□□□□□ -0.53
CiitaP79621 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm6855-201ENSMUST00000206307 790 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Gm5449-201ENSMUST00000081132 357 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Gm8325-201ENSMUST00000099086 453 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CiitaP79621 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CiitaP79621 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CiitaP79621 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.77□□□□□ -0.53
CiitaP79621 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CiitaP79621 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CiitaP79621 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.76□□□□□ -0.53
CiitaP79621 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.76□□□□□ -0.53
CiitaP79621 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.76□□□□□ -0.53
CiitaP79621 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CiitaP79621 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CiitaP79621 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CiitaP79621 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CiitaP79621 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms