Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Gm28624-201ENSMUST00000186430 2131 ntBASIC13.05□□□□□ -0.32
Rad50P70388 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC13.05□□□□□ -0.32
Rad50P70388 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.05□□□□□ -0.32
Rad50P70388 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.05□□□□□ -0.32
Rad50P70388 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rad50P70388 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC13.05□□□□□ -0.32
Rad50P70388 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC13.05□□□□□ -0.32
Rad50P70388 AC159196.1-201ENSMUST00000225524 377 ntBASIC13.05□□□□□ -0.32
Rad50P70388 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 Gm38357-201ENSMUST00000195382 2464 ntBASIC13.05□□□□□ -0.32
Rad50P70388 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Rad50P70388 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rad50P70388 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rad50P70388 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Rad50P70388 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Rad50P70388 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC13.04□□□□□ -0.32
Rad50P70388 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Gm25226-201ENSMUST00000158198 123 ntBASIC13.04□□□□□ -0.32
Rad50P70388 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Rad50P70388 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.04□□□□□ -0.32
Rad50P70388 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rad50P70388 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rad50P70388 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rad50P70388 Gm8325-201ENSMUST00000099086 453 ntBASIC13.04□□□□□ -0.32
Rad50P70388 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.04□□□□□ -0.32
Rad50P70388 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.04□□□□□ -0.32
Rad50P70388 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 AC154528.2-201ENSMUST00000228432 3023 ntBASIC13.04□□□□□ -0.32
Rad50P70388 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC13.04□□□□□ -0.32
Rad50P70388 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rad50P70388 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 AC108416.1-201ENSMUST00000228755 1558 ntBASIC13.03□□□□□ -0.32
Rad50P70388 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Gm14993-201ENSMUST00000121180 164 ntBASIC13.03□□□□□ -0.32
Rad50P70388 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC13.03□□□□□ -0.32
Rad50P70388 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rad50P70388 Gm16030-201ENSMUST00000159098 603 ntBASIC13.03□□□□□ -0.32
Rad50P70388 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.03□□□□□ -0.32
Rad50P70388 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.03□□□□□ -0.32
Rad50P70388 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.03□□□□□ -0.32
Rad50P70388 Gm44647-201ENSMUST00000207402 428 ntBASIC13.03□□□□□ -0.32
Rad50P70388 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC13.03□□□□□ -0.32
Rad50P70388 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.03□□□□□ -0.32
Rad50P70388 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.03□□□□□ -0.32
Rad50P70388 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.03□□□□□ -0.32
Rad50P70388 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rad50P70388 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 Bcl2-202ENSMUST00000189999 2841 ntBASIC13.03□□□□□ -0.32
Rad50P70388 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rad50P70388 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms