Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.74□□□□□ -0.53
PrkcbP68404 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.74□□□□□ -0.53
PrkcbP68404 Gm43506-201ENSMUST00000200675 753 ntBASIC11.74□□□□□ -0.53
PrkcbP68404 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.74□□□□□ -0.53
PrkcbP68404 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.74□□□□□ -0.53
PrkcbP68404 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
PrkcbP68404 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkcbP68404 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
PrkcbP68404 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkcbP68404 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkcbP68404 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PrkcbP68404 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.74□□□□□ -0.53
PrkcbP68404 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.74□□□□□ -0.53
PrkcbP68404 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
PrkcbP68404 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PrkcbP68404 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
PrkcbP68404 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkcbP68404 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PrkcbP68404 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PrkcbP68404 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkcbP68404 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkcbP68404 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
PrkcbP68404 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.73□□□□□ -0.53
PrkcbP68404 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
PrkcbP68404 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
PrkcbP68404 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
PrkcbP68404 Gm16518-201ENSMUST00000117960 508 ntBASIC11.73□□□□□ -0.53
PrkcbP68404 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.73□□□□□ -0.53
PrkcbP68404 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.73□□□□□ -0.53
PrkcbP68404 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
PrkcbP68404 Gm24328-201ENSMUST00000175104 67 ntBASIC11.73□□□□□ -0.53
PrkcbP68404 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.73□□□□□ -0.53
PrkcbP68404 Gm24312-201ENSMUST00000178677 119 ntBASIC11.73□□□□□ -0.53
PrkcbP68404 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.73□□□□□ -0.53
PrkcbP68404 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
PrkcbP68404 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.73□□□□□ -0.53
PrkcbP68404 Gm27441-201ENSMUST00000185000 105 ntBASIC11.73□□□□□ -0.53
PrkcbP68404 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.73□□□□□ -0.53
PrkcbP68404 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.73□□□□□ -0.53
PrkcbP68404 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.73□□□□□ -0.53
PrkcbP68404 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.73□□□□□ -0.53
PrkcbP68404 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
PrkcbP68404 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
PrkcbP68404 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
PrkcbP68404 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.73□□□□□ -0.53
PrkcbP68404 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
PrkcbP68404 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcbP68404 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PrkcbP68404 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcbP68404 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.72□□□□□ -0.53
PrkcbP68404 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PrkcbP68404 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcbP68404 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcbP68404 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PrkcbP68404 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcbP68404 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcbP68404 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcbP68404 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
PrkcbP68404 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcbP68404 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcbP68404 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
PrkcbP68404 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcbP68404 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
PrkcbP68404 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.72□□□□□ -0.53
PrkcbP68404 Gm5764-201ENSMUST00000118817 885 ntBASIC11.72□□□□□ -0.53
PrkcbP68404 Gm11573-201ENSMUST00000119956 394 ntBASIC11.72□□□□□ -0.53
PrkcbP68404 Gm11993-201ENSMUST00000121861 820 ntBASIC11.72□□□□□ -0.53
PrkcbP68404 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.72□□□□□ -0.53
PrkcbP68404 Gm16547-201ENSMUST00000159474 293 ntBASIC11.72□□□□□ -0.53
PrkcbP68404 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcbP68404 Mir6941-201ENSMUST00000184711 59 ntBASIC11.72□□□□□ -0.53
PrkcbP68404 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
PrkcbP68404 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.72□□□□□ -0.53
PrkcbP68404 Gm42751-201ENSMUST00000198065 559 ntBASIC11.72□□□□□ -0.53
PrkcbP68404 Gm44498-201ENSMUST00000199509 111 ntBASIC11.72□□□□□ -0.53
PrkcbP68404 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms