Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.09□□□□□ -0.63
Tubgcp3P58854 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Gm25766-201ENSMUST00000104101 131 ntBASIC11.09□□□□□ -0.63
Tubgcp3P58854 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.09□□□□□ -0.63
Tubgcp3P58854 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Gm37597-201ENSMUST00000191853 382 ntBASIC11.09□□□□□ -0.63
Tubgcp3P58854 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.09□□□□□ -0.63
Tubgcp3P58854 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.09□□□□□ -0.63
Tubgcp3P58854 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.09□□□□□ -0.63
Tubgcp3P58854 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.09□□□□□ -0.63
Tubgcp3P58854 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tubgcp3P58854 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Tubgcp3P58854 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Gm3828-201ENSMUST00000121817 257 ntBASIC11.08□□□□□ -0.64
Tubgcp3P58854 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.08□□□□□ -0.64
Tubgcp3P58854 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.08□□□□□ -0.64
Tubgcp3P58854 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.08□□□□□ -0.64
Tubgcp3P58854 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Gm42997-202ENSMUST00000200321 985 ntBASIC11.08□□□□□ -0.64
Tubgcp3P58854 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Gm2875-201ENSMUST00000211333 360 ntBASIC11.08□□□□□ -0.64
Tubgcp3P58854 Gm30671-201ENSMUST00000214898 318 ntBASIC11.08□□□□□ -0.64
Tubgcp3P58854 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.08□□□□□ -0.64
Tubgcp3P58854 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.08□□□□□ -0.64
Tubgcp3P58854 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tubgcp3P58854 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tubgcp3P58854 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.07□□□□□ -0.64
Tubgcp3P58854 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tubgcp3P58854 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Tubgcp3P58854 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tubgcp3P58854 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tubgcp3P58854 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tubgcp3P58854 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tubgcp3P58854 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tubgcp3P58854 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.07□□□□□ -0.64
Tubgcp3P58854 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tubgcp3P58854 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tubgcp3P58854 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tubgcp3P58854 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Tubgcp3P58854 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.07□□□□□ -0.64
Tubgcp3P58854 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.07□□□□□ -0.64
Tubgcp3P58854 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms