Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Vcam1P29533 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Vcam1P29533 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vcam1P29533 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Vcam1P29533 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vcam1P29533 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vcam1P29533 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vcam1P29533 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vcam1P29533 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vcam1P29533 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Vcam1P29533 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.45□□□□□ -0.42
Vcam1P29533 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Vcam1P29533 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.45□□□□□ -0.42
Vcam1P29533 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vcam1P29533 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Gm8482-201ENSMUST00000117972 471 ntBASIC12.45□□□□□ -0.42
Vcam1P29533 Gm13841-201ENSMUST00000118829 483 ntBASIC12.45□□□□□ -0.42
Vcam1P29533 Gm11449-201ENSMUST00000119175 476 ntBASIC12.45□□□□□ -0.42
Vcam1P29533 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vcam1P29533 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.45□□□□□ -0.42
Vcam1P29533 Gm8210-201ENSMUST00000178557 483 ntBASIC12.45□□□□□ -0.42
Vcam1P29533 Gm15454-201ENSMUST00000179718 483 ntBASIC12.45□□□□□ -0.42
Vcam1P29533 Gm7765-201ENSMUST00000182585 974 ntBASIC12.45□□□□□ -0.42
Vcam1P29533 Gm8918-201ENSMUST00000190587 1087 ntBASIC12.45□□□□□ -0.42
Vcam1P29533 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.45□□□□□ -0.42
Vcam1P29533 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC12.45□□□□□ -0.42
Vcam1P29533 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC12.45□□□□□ -0.42
Vcam1P29533 AC107752.1-201ENSMUST00000219362 469 ntBASIC12.45□□□□□ -0.42
Vcam1P29533 Gm3791-201ENSMUST00000220790 768 ntBASIC12.45□□□□□ -0.42
Vcam1P29533 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Gm6344-201ENSMUST00000075962 483 ntBASIC12.45□□□□□ -0.42
Vcam1P29533 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vcam1P29533 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.45□□□□□ -0.42
Vcam1P29533 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Vcam1P29533 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vcam1P29533 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.45□□□□□ -0.42
Vcam1P29533 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.45□□□□□ -0.42
Vcam1P29533 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.45□□□□□ -0.42
Vcam1P29533 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vcam1P29533 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Vcam1P29533 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Vcam1P29533 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Vcam1P29533 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.44□□□□□ -0.42
Vcam1P29533 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Gm6238-201ENSMUST00000120999 465 ntBASIC12.44□□□□□ -0.42
Vcam1P29533 Gm14006-201ENSMUST00000122132 981 ntBASIC12.44□□□□□ -0.42
Vcam1P29533 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC12.44□□□□□ -0.42
Vcam1P29533 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC12.44□□□□□ -0.42
Vcam1P29533 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC12.44□□□□□ -0.42
Vcam1P29533 Gm9515-201ENSMUST00000200276 647 ntBASIC12.44□□□□□ -0.42
Vcam1P29533 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC12.44□□□□□ -0.42
Vcam1P29533 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Vcam1P29533 Gm8557-201ENSMUST00000220777 475 ntBASIC12.44□□□□□ -0.42
Vcam1P29533 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.44□□□□□ -0.42
Vcam1P29533 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.44□□□□□ -0.42
Vcam1P29533 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.44□□□□□ -0.42
Vcam1P29533 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vcam1P29533 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vcam1P29533 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.43□□□□□ -0.42
Vcam1P29533 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms