Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm25018-201ENSMUST00000179081 119 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Nfkb1P25799 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 Gm25212-201ENSMUST00000179432 119 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 Gm26391-201ENSMUST00000179843 119 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 Gm18014-201ENSMUST00000183369 817 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.22□□□□□ -0.61
Nfkb1P25799 Gm37852-201ENSMUST00000193027 350 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nfkb1P25799 Gm43778-201ENSMUST00000199438 199 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Nfkb1P25799 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nfkb1P25799 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nfkb1P25799 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nfkb1P25799 Gm24089-201ENSMUST00000093696 109 ntBASIC11.22□□□□□ -0.61
Nfkb1P25799 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nfkb1P25799 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nfkb1P25799 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Nfkb1P25799 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nfkb1P25799 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Nfkb1P25799 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nfkb1P25799 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nfkb1P25799 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nfkb1P25799 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nfkb1P25799 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nfkb1P25799 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Nfkb1P25799 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.21□□□□□ -0.61
Nfkb1P25799 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nfkb1P25799 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nfkb1P25799 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nfkb1P25799 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Nfkb1P25799 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.21□□□□□ -0.61
Nfkb1P25799 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.21□□□□□ -0.61
Nfkb1P25799 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC11.21□□□□□ -0.61
Nfkb1P25799 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nfkb1P25799 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.21□□□□□ -0.61
Nfkb1P25799 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.21□□□□□ -0.61
Nfkb1P25799 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.21□□□□□ -0.61
Nfkb1P25799 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nfkb1P25799 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.21□□□□□ -0.61
Nfkb1P25799 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nfkb1P25799 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nfkb1P25799 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nfkb1P25799 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Nfkb1P25799 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nfkb1P25799 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Nfkb1P25799 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Nfkb1P25799 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nfkb1P25799 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nfkb1P25799 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nfkb1P25799 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nfkb1P25799 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nfkb1P25799 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nfkb1P25799 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nfkb1P25799 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nfkb1P25799 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nfkb1P25799 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nfkb1P25799 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nfkb1P25799 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nfkb1P25799 Gm14274-201ENSMUST00000117182 615 ntBASIC11.2□□□□□ -0.62
Nfkb1P25799 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms