Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Gm26134-201ENSMUST00000178484 110 ntBASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Mir7032-201ENSMUST00000185154 79 ntBASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Gm28324-201ENSMUST00000187913 264 ntBASIC11.85□□□□□ -0.51
Chmp6P0C0A3 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp6P0C0A3 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Gm14270-201ENSMUST00000118388 846 ntBASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Gm13284-201ENSMUST00000121020 547 ntBASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Gm25580-201ENSMUST00000083409 327 ntBASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp6P0C0A3 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Chmp6P0C0A3 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Chmp6P0C0A3 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Gm10169-201ENSMUST00000121822 348 ntBASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Gm25343-201ENSMUST00000157460 107 ntBASIC11.83□□□□□ -0.52
Chmp6P0C0A3 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms