Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup88Q8CEC0 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Gm25148-201ENSMUST00000104611 123 ntBASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Gm11801-201ENSMUST00000117807 746 ntBASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Gm14270-201ENSMUST00000118388 846 ntBASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Gm13422-201ENSMUST00000118834 504 ntBASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Gm15329-201ENSMUST00000121408 155 ntBASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Gm16380-201ENSMUST00000077997 478 ntBASIC12.84□□□□□ -0.35
Nup88Q8CEC0 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nup88Q8CEC0 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup88Q8CEC0 Gm12799-201ENSMUST00000118151 2560 ntBASIC12.83□□□□□ -0.35
Nup88Q8CEC0 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Nup88Q8CEC0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup88Q8CEC0 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup88Q8CEC0 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup88Q8CEC0 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.83□□□□□ -0.36
Nup88Q8CEC0 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Gm15528-201ENSMUST00000117821 864 ntBASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Gm12791-201ENSMUST00000120788 655 ntBASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Gm13022-201ENSMUST00000121181 285 ntBASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nup88Q8CEC0 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms