Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Alx1Q8C8B0 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.66□□□□□ -0.38
Alx1Q8C8B0 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.66□□□□□ -0.38
Alx1Q8C8B0 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Alx1Q8C8B0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Alx1Q8C8B0 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Alx1Q8C8B0 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm15264-201ENSMUST00000118050 502 ntBASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm15554-201ENSMUST00000120406 913 ntBASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm26989-201ENSMUST00000182608 749 ntBASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm4812-201ENSMUST00000182847 993 ntBASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm8918-201ENSMUST00000190587 1087 ntBASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm37723-201ENSMUST00000194480 565 ntBASIC12.65□□□□□ -0.38
Alx1Q8C8B0 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gm44304-201ENSMUST00000200509 145 ntBASIC12.65□□□□□ -0.38
Alx1Q8C8B0 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.65□□□□□ -0.38
Alx1Q8C8B0 AC154431.1-201ENSMUST00000224910 880 ntBASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Alx1Q8C8B0 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Alx1Q8C8B0 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Mir291b-201ENSMUST00000104838 79 ntBASIC12.64□□□□□ -0.39
Alx1Q8C8B0 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Gm26208-201ENSMUST00000158677 124 ntBASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.64□□□□□ -0.39
Alx1Q8C8B0 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.64□□□□□ -0.39
Alx1Q8C8B0 AC154806.7-201ENSMUST00000227998 202 ntBASIC12.64□□□□□ -0.39
Alx1Q8C8B0 AC164883.7-201ENSMUST00000228534 851 ntBASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Gm45719-201ENSMUST00000207954 1662 ntBASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx1Q8C8B0 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms