Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm5178-201ENSMUST00000219380 898 ntBASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdh8Q7TSK3 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.77□□□□□ -0.68
Pcdh8Q7TSK3 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdh8Q7TSK3 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdh8Q7TSK3 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.68
Pcdh8Q7TSK3 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdh8Q7TSK3 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdh8Q7TSK3 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdh8Q7TSK3 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdh8Q7TSK3 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Gm13047-201ENSMUST00000117116 815 ntBASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdh8Q7TSK3 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Gm26272-201ENSMUST00000179241 132 ntBASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Gm9162-201ENSMUST00000182081 991 ntBASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Gm19927-201ENSMUST00000185792 781 ntBASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Gm43969-201ENSMUST00000204833 535 ntBASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.76□□□□□ -0.69
Pcdh8Q7TSK3 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms