Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna5Q2MKA5 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Gm11235-201ENSMUST00000117763 333 ntBASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Gm12254-201ENSMUST00000134617 471 ntBASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Gm26208-201ENSMUST00000158677 124 ntBASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Gm5801-201ENSMUST00000182247 780 ntBASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Gm28391-201ENSMUST00000185202 379 ntBASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Gm29528-201ENSMUST00000186699 379 ntBASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Gm29526-201ENSMUST00000187217 379 ntBASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 AC165092.1-201ENSMUST00000224018 486 ntBASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chrna5Q2MKA5 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chrna5Q2MKA5 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chrna5Q2MKA5 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chrna5Q2MKA5 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 A1cf-204ENSMUST00000224564 1432 ntBASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gm16480-201ENSMUST00000120439 832 ntBASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gm5501-201ENSMUST00000165917 832 ntBASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gm40332-201ENSMUST00000199847 938 ntBASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gm2716-201ENSMUST00000212350 643 ntBASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna5Q2MKA5 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms