Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Gm12592-201ENSMUST00000155332 2954 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Lsm3P62311 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC9.78□□□□□ -0.84
Lsm3P62311 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC9.78□□□□□ -0.84
Lsm3P62311 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Lsm3P62311 Gm14592-201ENSMUST00000117201 560 ntBASIC9.78□□□□□ -0.84
Lsm3P62311 Gm11509-201ENSMUST00000117358 325 ntBASIC9.78□□□□□ -0.84
Lsm3P62311 Gm12390-201ENSMUST00000117897 397 ntBASIC9.78□□□□□ -0.84
Lsm3P62311 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC9.78□□□□□ -0.84
Lsm3P62311 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Zfp60-208ENSMUST00000167955 2115 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Lsm3P62311 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
Lsm3P62311 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.78□□□□□ -0.84
Lsm3P62311 Gm38151-201ENSMUST00000195085 289 ntBASIC9.78□□□□□ -0.84
Lsm3P62311 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.78□□□□□ -0.84
Lsm3P62311 Gm4157-201ENSMUST00000211647 679 ntBASIC9.78□□□□□ -0.84
Lsm3P62311 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Lsm3P62311 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC9.78□□□□□ -0.84
Lsm3P62311 Dpy19l2-201ENSMUST00000133010 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Lsm3P62311 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Sftpa1-202ENSMUST00000170719 2854 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.78□□□□□ -0.84
Lsm3P62311 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Lsm3P62311 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 5330439K02Rik-201ENSMUST00000180953 2312 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Lsm3P62311 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC9.78□□□□□ -0.84
Lsm3P62311 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Fignl1-207ENSMUST00000171938 2974 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Slc25a44-201ENSMUST00000057935 3577 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Cilp-201ENSMUST00000048762 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lsm3P62311 AU040320-203ENSMUST00000102608 4073 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lsm3P62311 Sept6-202ENSMUST00000060474 3457 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lsm3P62311 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lsm3P62311 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lsm3P62311 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.77□□□□□ -0.84
Lsm3P62311 Gm4784-201ENSMUST00000117365 1824 ntBASIC9.77□□□□□ -0.84
Lsm3P62311 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lsm3P62311 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.77□□□□□ -0.84
Lsm3P62311 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.77□□□□□ -0.84
Lsm3P62311 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Gm12059-201ENSMUST00000128996 3105 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Lsm3P62311 Wdhd1-201ENSMUST00000111790 2962 ntTSL 2 BASIC9.77□□□□□ -0.85
Lsm3P62311 Baiap3-201ENSMUST00000169109 3630 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Lsm3P62311 Nupl1-201ENSMUST00000225805 3602 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Lsm3P62311 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Lsm3P62311 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Lsm3P62311 Gm22018-201ENSMUST00000104357 131 ntBASIC9.77□□□□□ -0.85
Lsm3P62311 Gm25148-201ENSMUST00000104611 123 ntBASIC9.77□□□□□ -0.85
Lsm3P62311 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.77□□□□□ -0.85
Lsm3P62311 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Gm3096-201ENSMUST00000185770 364 ntBASIC9.77□□□□□ -0.85
Lsm3P62311 Gm43058-201ENSMUST00000197645 625 ntBASIC9.77□□□□□ -0.85
Lsm3P62311 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.77□□□□□ -0.85
Lsm3P62311 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC9.77□□□□□ -0.85
Lsm3P62311 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC9.77□□□□□ -0.85
Lsm3P62311 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Slc2a1-201ENSMUST00000030398 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Gm37651-201ENSMUST00000194679 1494 ntBASIC9.77□□□□□ -0.85
Lsm3P62311 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Lsm3P62311 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lsm3P62311 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.77□□□□□ -0.85
Lsm3P62311 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
Lsm3P62311 Arhgap36-201ENSMUST00000042444 2733 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Lsm3P62311 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Plk4-201ENSMUST00000026858 3479 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm3P62311 Gm37032-201ENSMUST00000194882 2975 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms