Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rrp1P56183 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rrp1P56183 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rrp1P56183 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Rrp1P56183 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Rrp1P56183 Gm21817-201ENSMUST00000178584 2583 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rrp1P56183 Gm13422-201ENSMUST00000118834 504 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.23□□□□□ -0.45
Rrp1P56183 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC12.23□□□□□ -0.45
Rrp1P56183 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.23□□□□□ -0.45
Rrp1P56183 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.23□□□□□ -0.45
Rrp1P56183 Gm44155-201ENSMUST00000203923 412 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 Gm44100-201ENSMUST00000204329 436 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 Mt1-202ENSMUST00000211807 1085 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Rrp1P56183 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.23□□□□□ -0.45
Rrp1P56183 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC12.23□□□□□ -0.45
Rrp1P56183 Gm37516-201ENSMUST00000192593 1954 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rrp1P56183 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rrp1P56183 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC12.23□□□□□ -0.45
Rrp1P56183 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC12.23□□□□□ -0.45
Rrp1P56183 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC12.22□□□□□ -0.45
Rrp1P56183 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.22□□□□□ -0.45
Rrp1P56183 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.22□□□□□ -0.45
Rrp1P56183 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rrp1P56183 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.22□□□□□ -0.45
Rrp1P56183 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrp1P56183 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Rrp1P56183 Gm12165-201ENSMUST00000117047 342 ntBASIC12.22□□□□□ -0.45
Rrp1P56183 Gm16166-201ENSMUST00000118291 787 ntBASIC12.22□□□□□ -0.45
Rrp1P56183 Gm13284-201ENSMUST00000121020 547 ntBASIC12.22□□□□□ -0.45
Rrp1P56183 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.22□□□□□ -0.45
Rrp1P56183 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.22□□□□□ -0.45
Rrp1P56183 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Gm21092-201ENSMUST00000178995 955 ntBASIC12.22□□□□□ -0.45
Rrp1P56183 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Rrp1P56183 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rrp1P56183 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Mir7686-201ENSMUST00000200604 57 ntBASIC12.22□□□□□ -0.45
Rrp1P56183 Gm45310-201ENSMUST00000210436 275 ntBASIC12.22□□□□□ -0.45
Rrp1P56183 Gm8959-201ENSMUST00000213150 571 ntBASIC12.22□□□□□ -0.45
Rrp1P56183 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.22□□□□□ -0.45
Rrp1P56183 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrp1P56183 Gm44888-201ENSMUST00000209119 2541 ntBASIC12.22□□□□□ -0.45
Rrp1P56183 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rrp1P56183 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrp1P56183 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrp1P56183 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rrp1P56183 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms