Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.5□□□□□ -0.57
Shmt1P50431 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Shmt1P50431 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Shmt1P50431 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Shmt1P50431 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Shmt1P50431 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Shmt1P50431 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Shmt1P50431 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Shmt1P50431 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Shmt1P50431 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Shmt1P50431 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.49□□□□□ -0.57
Shmt1P50431 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Shmt1P50431 Gm18733-202ENSMUST00000174447 401 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Gm23647-201ENSMUST00000175042 109 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Gm24328-201ENSMUST00000175104 67 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Rn5s-201ENSMUST00000177555 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Gm22109-201ENSMUST00000177995 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Gm22291-201ENSMUST00000178027 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Gm23284-201ENSMUST00000178069 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Gm25018-201ENSMUST00000179081 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Gm25212-201ENSMUST00000179432 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Gm26391-201ENSMUST00000179843 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Gm4903-201ENSMUST00000210462 405 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Gm45500-201ENSMUST00000211676 803 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.49□□□□□ -0.57
Shmt1P50431 Gm24089-201ENSMUST00000093696 109 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Shmt1P50431 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.49□□□□□ -0.57
Shmt1P50431 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shmt1P50431 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms