Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.68□□□□□ -0.86
P20040 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
P20040 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
P20040 Gm25076-201ENSMUST00000104098 132 ntBASIC9.68□□□□□ -0.86
P20040 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC9.68□□□□□ -0.86
P20040 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.68□□□□□ -0.86
P20040 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC9.68□□□□□ -0.86
P20040 Gm16071-201ENSMUST00000119589 793 ntBASIC9.68□□□□□ -0.86
P20040 Gm14942-201ENSMUST00000119642 336 ntBASIC9.68□□□□□ -0.86
P20040 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.68□□□□□ -0.86
P20040 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.68□□□□□ -0.86
P20040 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.68□□□□□ -0.86
P20040 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.68□□□□□ -0.86
P20040 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
P20040 Gm17826-201ENSMUST00000189720 798 ntBASIC9.68□□□□□ -0.86
P20040 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Gm5542-201ENSMUST00000195485 1089 ntBASIC9.68□□□□□ -0.86
P20040 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
P20040 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.68□□□□□ -0.86
P20040 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.68□□□□□ -0.86
P20040 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
P20040 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
P20040 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
P20040 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
P20040 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
P20040 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
P20040 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Gm11667-201ENSMUST00000119828 486 ntBASIC9.67□□□□□ -0.86
P20040 Gm15329-201ENSMUST00000121408 155 ntBASIC9.67□□□□□ -0.86
P20040 Gm15549-201ENSMUST00000121595 622 ntBASIC9.67□□□□□ -0.86
P20040 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC9.67□□□□□ -0.86
P20040 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.67□□□□□ -0.86
P20040 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC9.67□□□□□ -0.86
P20040 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.67□□□□□ -0.86
P20040 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC9.67□□□□□ -0.86
P20040 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Gm44008-201ENSMUST00000204345 412 ntBASIC9.67□□□□□ -0.86
P20040 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC9.67□□□□□ -0.86
P20040 Gm9661-201ENSMUST00000221611 1122 ntBASIC9.67□□□□□ -0.86
P20040 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.67□□□□□ -0.86
P20040 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.67□□□□□ -0.86
P20040 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.67□□□□□ -0.86
P20040 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
P20040 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
P20040 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Snora73b-201ENSMUST00000083419 205 ntBASIC9.67□□□□□ -0.86
P20040 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.67□□□□□ -0.86
P20040 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC9.67□□□□□ -0.86
P20040 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
P20040 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 AA474408-201ENSMUST00000098110 3339 ntBASIC9.67□□□□□ -0.86
P20040 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P20040 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
P20040 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Gm33366-201ENSMUST00000195583 3827 ntBASIC9.66□□□□□ -0.86
P20040 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P20040 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.66□□□□□ -0.86
P20040 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
P20040 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms