Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.54□□□□□ -0.88
P04224 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
P04224 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
P04224 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.53□□□□□ -0.88
P04224 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC9.53□□□□□ -0.88
P04224 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Prrc1-201ENSMUST00000025490 4801 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.53□□□□□ -0.88
P04224 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
P04224 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
P04224 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.53□□□□□ -0.88
P04224 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC9.53□□□□□ -0.88
P04224 Gm11509-201ENSMUST00000117358 325 ntBASIC9.53□□□□□ -0.88
P04224 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
P04224 Gm11783-201ENSMUST00000119549 885 ntBASIC9.53□□□□□ -0.88
P04224 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC9.53□□□□□ -0.88
P04224 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.53□□□□□ -0.88
P04224 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC9.53□□□□□ -0.88
P04224 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC9.53□□□□□ -0.88
P04224 AA914427-201ENSMUST00000193194 1166 ntBASIC9.53□□□□□ -0.88
P04224 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC9.53□□□□□ -0.88
P04224 Gm44364-201ENSMUST00000198368 141 ntBASIC9.53□□□□□ -0.88
P04224 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
P04224 Gm13097-201ENSMUST00000210722 397 ntBASIC9.53□□□□□ -0.88
P04224 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.53□□□□□ -0.88
P04224 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
P04224 Gm8399-201ENSMUST00000082300 1117 ntBASIC9.53□□□□□ -0.88
P04224 Gm26448-201ENSMUST00000082446 203 ntBASIC9.53□□□□□ -0.88
P04224 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
P04224 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Gm10782-202ENSMUST00000223775 1480 ntBASIC9.53□□□□□ -0.88
P04224 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.53□□□□□ -0.88
P04224 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
P04224 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
P04224 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
P04224 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
P04224 Myo1c-202ENSMUST00000102504 4659 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
P04224 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.52□□□□□ -0.88
P04224 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
P04224 Pear1-202ENSMUST00000079083 4297 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
P04224 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
P04224 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
P04224 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.52□□□□□ -0.89
P04224 Gm38910-201ENSMUST00000204630 2448 ntBASIC9.52□□□□□ -0.89
P04224 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Adamts4-202ENSMUST00000111315 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC9.52□□□□□ -0.89
P04224 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.52□□□□□ -0.89
P04224 Gm13665-201ENSMUST00000120830 528 ntBASIC9.52□□□□□ -0.89
P04224 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC9.52□□□□□ -0.89
P04224 Gm5616-201ENSMUST00000165252 384 ntBASIC9.52□□□□□ -0.89
P04224 Gm20482-202ENSMUST00000174729 825 ntBASIC9.52□□□□□ -0.89
P04224 Gm8741-201ENSMUST00000174736 384 ntBASIC9.52□□□□□ -0.89
P04224 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
P04224 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC9.52□□□□□ -0.89
P04224 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Gm38317-201ENSMUST00000195564 343 ntBASIC9.52□□□□□ -0.89
P04224 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 AY036118-201ENSMUST00000200021 923 ntBASIC9.52□□□□□ -0.89
P04224 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.52□□□□□ -0.89
P04224 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
P04224 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.52□□□□□ -0.89
P04224 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.52□□□□□ -0.89
P04224 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.52□□□□□ -0.89
P04224 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
P04224 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.52□□□□□ -0.89
P04224 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms