Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Gm12218-201ENSMUST00000117666 399 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Gm13888-201ENSMUST00000119148 422 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Gm24992-201ENSMUST00000157412 130 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Gm21778-201ENSMUST00000178779 471 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Gm3551-201ENSMUST00000190750 664 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Gm5451-201ENSMUST00000080545 579 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61a2Q9JLR1 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Gm13422-201ENSMUST00000118834 504 ntBASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Gm19246-201ENSMUST00000173599 255 ntBASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Gm29067-201ENSMUST00000190821 470 ntBASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Gm19324-201ENSMUST00000213229 1169 ntBASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.84□□□□□ -0.83
Sec61a2Q9JLR1 Gm9661-201ENSMUST00000221611 1122 ntBASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms