Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc28bQ8CEG5 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 CT009601.1-201ENSMUST00000225567 2705 ntBASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 AC159819.3-201ENSMUST00000216940 1837 ntBASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm12218-201ENSMUST00000117666 399 ntBASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm24749-201ENSMUST00000157838 343 ntBASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm19246-201ENSMUST00000173599 255 ntBASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm7985-201ENSMUST00000183329 981 ntBASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm38266-201ENSMUST00000194931 421 ntBASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm10288-201ENSMUST00000084614 537 ntBASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm45191-201ENSMUST00000205846 5439 ntBASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm12709-201ENSMUST00000149348 1912 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Proser3-201ENSMUST00000062708 1905 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc28bQ8CEG5 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Sytl4-202ENSMUST00000113294 2958 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Actn2-203ENSMUST00000168193 2920 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Gm25881-201ENSMUST00000157783 103 ntBASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Gm38341-201ENSMUST00000195357 515 ntBASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Gm17825-201ENSMUST00000206836 794 ntBASIC10.74□□□□□ -0.69
Ccdc28bQ8CEG5 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms