Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Mir7051-201ENSMUST00000184167 73 ntBASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Gm37246-201ENSMUST00000192665 835 ntBASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Gm42859-201ENSMUST00000199572 193 ntBASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Nhlrc3Q8CCH2 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gm14277-201ENSMUST00000121195 360 ntBASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gm7985-201ENSMUST00000183329 981 ntBASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gm28450-201ENSMUST00000187349 638 ntBASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 CT009601.1-201ENSMUST00000225567 2705 ntBASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Nhlrc3Q8CCH2 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms