Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Gm8162-201ENSMUST00000213951 665 ntBASIC11.22□□□□□ -0.61
Trub1Q8C0D0 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.22□□□□□ -0.61
Trub1Q8C0D0 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Spata33-207ENSMUST00000212760 4074 ntBASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trub1Q8C0D0 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.21□□□□□ -0.61
Trub1Q8C0D0 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Gm15264-201ENSMUST00000118050 502 ntBASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Gm11380-201ENSMUST00000118067 560 ntBASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.21□□□□□ -0.61
Trub1Q8C0D0 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trub1Q8C0D0 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trub1Q8C0D0 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trub1Q8C0D0 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trub1Q8C0D0 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trub1Q8C0D0 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trub1Q8C0D0 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trub1Q8C0D0 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trub1Q8C0D0 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.21□□□□□ -0.62
Trub1Q8C0D0 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trub1Q8C0D0 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.62
Trub1Q8C0D0 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.21□□□□□ -0.62
Trub1Q8C0D0 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Gm12899-201ENSMUST00000120565 551 ntBASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Gm12791-201ENSMUST00000120788 655 ntBASIC11.2□□□□□ -0.62
Trub1Q8C0D0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms