Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm5801-201ENSMUST00000182247 780 ntBASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Gm8707-201ENSMUST00000183325 980 ntBASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Gm3791-201ENSMUST00000220790 768 ntBASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Gm8618-201ENSMUST00000097570 432 ntBASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Gm38111-201ENSMUST00000194817 2741 ntBASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ddx55Q6ZPL9 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Gm11544-201ENSMUST00000120215 382 ntBASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 BB187690-201ENSMUST00000198619 1176 ntBASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 AC139155.1-201ENSMUST00000226043 444 ntBASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 AC164883.7-201ENSMUST00000228534 851 ntBASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Gm10581-201ENSMUST00000097986 231 ntBASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ddx55Q6ZPL9 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ddx55Q6ZPL9 Klf10-203ENSMUST00000227920 2144 ntBASIC12.4□□□□□ -0.43
Ddx55Q6ZPL9 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ddx55Q6ZPL9 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Gm22662-201ENSMUST00000175290 256 ntBASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Ddx55Q6ZPL9 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms