Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Gm4732-201ENSMUST00000118778 473 ntBASIC9.82□□□□□ -0.84
SgcbP82349 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.82□□□□□ -0.84
SgcbP82349 Gm12030-201ENSMUST00000121917 223 ntBASIC9.82□□□□□ -0.84
SgcbP82349 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.82□□□□□ -0.84
SgcbP82349 Gm23153-201ENSMUST00000175323 313 ntBASIC9.82□□□□□ -0.84
SgcbP82349 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Gm28941-201ENSMUST00000185536 1017 ntBASIC9.82□□□□□ -0.84
SgcbP82349 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Gm5100-201ENSMUST00000195631 589 ntBASIC9.82□□□□□ -0.84
SgcbP82349 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Gm6439-201ENSMUST00000199849 862 ntBASIC9.82□□□□□ -0.84
SgcbP82349 Gm43671-201ENSMUST00000200422 433 ntBASIC9.82□□□□□ -0.84
SgcbP82349 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.82□□□□□ -0.84
SgcbP82349 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 AC102542.1-201ENSMUST00000225204 1138 ntBASIC9.82□□□□□ -0.84
SgcbP82349 AC154305.2-201ENSMUST00000225813 901 ntBASIC9.82□□□□□ -0.84
SgcbP82349 AC140209.1-201ENSMUST00000227875 284 ntBASIC9.82□□□□□ -0.84
SgcbP82349 Gm9873-201ENSMUST00000063891 1097 ntBASIC9.82□□□□□ -0.84
SgcbP82349 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SgcbP82349 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.82□□□□□ -0.84
SgcbP82349 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC9.82□□□□□ -0.84
SgcbP82349 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
SgcbP82349 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
SgcbP82349 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.82□□□□□ -0.84
SgcbP82349 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.82□□□□□ -0.84
SgcbP82349 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SgcbP82349 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC9.82□□□□□ -0.84
SgcbP82349 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.81□□□□□ -0.84
SgcbP82349 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
SgcbP82349 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
SgcbP82349 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Gm17213-201ENSMUST00000165161 1360 ntBASIC9.81□□□□□ -0.84
SgcbP82349 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
SgcbP82349 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC9.81□□□□□ -0.84
SgcbP82349 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC9.81□□□□□ -0.84
SgcbP82349 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Gm12795-201ENSMUST00000117594 539 ntBASIC9.81□□□□□ -0.84
SgcbP82349 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC9.81□□□□□ -0.84
SgcbP82349 Gm15782-201ENSMUST00000121073 445 ntBASIC9.81□□□□□ -0.84
SgcbP82349 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC9.81□□□□□ -0.84
SgcbP82349 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC9.81□□□□□ -0.84
SgcbP82349 Gm25343-201ENSMUST00000157460 107 ntBASIC9.81□□□□□ -0.84
SgcbP82349 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Gm8492-201ENSMUST00000182375 987 ntBASIC9.81□□□□□ -0.84
SgcbP82349 Gm38210-201ENSMUST00000191944 809 ntBASIC9.81□□□□□ -0.84
SgcbP82349 Gm37684-201ENSMUST00000192779 355 ntBASIC9.81□□□□□ -0.84
SgcbP82349 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.81□□□□□ -0.84
SgcbP82349 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.81□□□□□ -0.84
SgcbP82349 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
SgcbP82349 Gm39288-201ENSMUST00000210554 446 ntBASIC9.81□□□□□ -0.84
SgcbP82349 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC9.81□□□□□ -0.84
SgcbP82349 Id2-203ENSMUST00000222667 958 ntBASIC9.81□□□□□ -0.84
SgcbP82349 AC140293.1-201ENSMUST00000225626 1247 ntBASIC9.81□□□□□ -0.84
SgcbP82349 AC129308.3-201ENSMUST00000225652 524 ntBASIC9.81□□□□□ -0.84
SgcbP82349 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC9.81□□□□□ -0.84
SgcbP82349 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
SgcbP82349 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SgcbP82349 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms