Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hmgb1P63158 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.06□□□□□ -0.48
Hmgb1P63158 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Hmgb1P63158 Spata33-207ENSMUST00000212760 4074 ntBASIC12.06□□□□□ -0.48
Hmgb1P63158 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmgb1P63158 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm23061-201ENSMUST00000102348 116 ntBASIC12.06□□□□□ -0.48
Hmgb1P63158 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.06□□□□□ -0.48
Hmgb1P63158 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm12986-201ENSMUST00000119037 967 ntBASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hmgb1P63158 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.06□□□□□ -0.48
Hmgb1P63158 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm42859-201ENSMUST00000199572 193 ntBASIC12.06□□□□□ -0.48
Hmgb1P63158 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Hmgb1P63158 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.06□□□□□ -0.48
Hmgb1P63158 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.06□□□□□ -0.48
Hmgb1P63158 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hmgb1P63158 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.06□□□□□ -0.48
Hmgb1P63158 Gm37145-201ENSMUST00000193540 2756 ntBASIC12.06□□□□□ -0.48
Hmgb1P63158 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hmgb1P63158 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmgb1P63158 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.05□□□□□ -0.48
Hmgb1P63158 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.05□□□□□ -0.48
Hmgb1P63158 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.05□□□□□ -0.48
Hmgb1P63158 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hmgb1P63158 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.05□□□□□ -0.48
Hmgb1P63158 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.05□□□□□ -0.48
Hmgb1P63158 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.05□□□□□ -0.48
Hmgb1P63158 Gm11949-201ENSMUST00000117640 372 ntBASIC12.05□□□□□ -0.48
Hmgb1P63158 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.05□□□□□ -0.48
Hmgb1P63158 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Hmgb1P63158 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.05□□□□□ -0.48
Hmgb1P63158 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.05□□□□□ -0.48
Hmgb1P63158 Gm44323-201ENSMUST00000198689 129 ntBASIC12.05□□□□□ -0.48
Hmgb1P63158 Gm43916-201ENSMUST00000205062 967 ntBASIC12.05□□□□□ -0.48
Hmgb1P63158 Mt1-202ENSMUST00000211807 1085 ntBASIC12.05□□□□□ -0.48
Hmgb1P63158 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.05□□□□□ -0.48
Hmgb1P63158 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.05□□□□□ -0.48
Hmgb1P63158 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hmgb1P63158 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Hmgb1P63158 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.05□□□□□ -0.48
Hmgb1P63158 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hmgb1P63158 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Gm12576-201ENSMUST00000135268 3036 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgb1P63158 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms