Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shmt1P50431 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shmt1P50431 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Shmt1P50431 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.51□□□□□ -0.57
Shmt1P50431 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Shmt1P50431 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Shmt1P50431 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.51□□□□□ -0.57
Shmt1P50431 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Shmt1P50431 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.51□□□□□ -0.57
Shmt1P50431 Gm5257-201ENSMUST00000121823 790 ntBASIC11.51□□□□□ -0.57
Shmt1P50431 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.51□□□□□ -0.57
Shmt1P50431 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.51□□□□□ -0.57
Shmt1P50431 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Shmt1P50431 Gm9372-201ENSMUST00000168454 430 ntBASIC11.51□□□□□ -0.57
Shmt1P50431 Gm4862-201ENSMUST00000170405 438 ntBASIC11.51□□□□□ -0.57
Shmt1P50431 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Shmt1P50431 Gm18201-201ENSMUST00000174735 875 ntBASIC11.51□□□□□ -0.57
Shmt1P50431 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.51□□□□□ -0.57
Shmt1P50431 Gm7719-201ENSMUST00000182374 975 ntBASIC11.51□□□□□ -0.57
Shmt1P50431 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Gm28746-201ENSMUST00000187453 380 ntBASIC11.51□□□□□ -0.57
Shmt1P50431 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Shmt1P50431 Gm43097-201ENSMUST00000196867 151 ntBASIC11.51□□□□□ -0.57
Shmt1P50431 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.51□□□□□ -0.57
Shmt1P50431 Gm8162-201ENSMUST00000213951 665 ntBASIC11.51□□□□□ -0.57
Shmt1P50431 Gm8170-201ENSMUST00000218581 945 ntBASIC11.51□□□□□ -0.57
Shmt1P50431 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Shmt1P50431 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Shmt1P50431 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Shmt1P50431 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Shmt1P50431 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shmt1P50431 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Shmt1P50431 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.5□□□□□ -0.57
Shmt1P50431 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Shmt1P50431 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.5□□□□□ -0.57
Shmt1P50431 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Shmt1P50431 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Gm13047-201ENSMUST00000117116 815 ntBASIC11.5□□□□□ -0.57
Shmt1P50431 Gm15003-201ENSMUST00000118884 446 ntBASIC11.5□□□□□ -0.57
Shmt1P50431 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.5□□□□□ -0.57
Shmt1P50431 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.5□□□□□ -0.57
Shmt1P50431 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Gm26119-201ENSMUST00000175601 104 ntBASIC11.5□□□□□ -0.57
Shmt1P50431 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.5□□□□□ -0.57
Shmt1P50431 Gm34379-201ENSMUST00000195036 290 ntBASIC11.5□□□□□ -0.57
Shmt1P50431 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.5□□□□□ -0.57
Shmt1P50431 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.5□□□□□ -0.57
Shmt1P50431 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Gm44605-201ENSMUST00000206892 949 ntBASIC11.5□□□□□ -0.57
Shmt1P50431 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.5□□□□□ -0.57
Shmt1P50431 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.5□□□□□ -0.57
Shmt1P50431 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Shmt1P50431 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Shmt1P50431 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shmt1P50431 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms