Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
P04224 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
P04224 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.55□□□□□ -0.88
P04224 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Ap1g1-206ENSMUST00000179104 1096 ntBASIC9.55□□□□□ -0.88
P04224 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC9.55□□□□□ -0.88
P04224 Gm29615-201ENSMUST00000185371 697 ntBASIC9.55□□□□□ -0.88
P04224 Gm28224-201ENSMUST00000186078 697 ntBASIC9.55□□□□□ -0.88
P04224 Gm29001-201ENSMUST00000186177 697 ntBASIC9.55□□□□□ -0.88
P04224 Gm28292-201ENSMUST00000186593 697 ntBASIC9.55□□□□□ -0.88
P04224 Gm28101-201ENSMUST00000187608 697 ntBASIC9.55□□□□□ -0.88
P04224 Gm29076-201ENSMUST00000187689 697 ntBASIC9.55□□□□□ -0.88
P04224 Gm28302-201ENSMUST00000187931 697 ntBASIC9.55□□□□□ -0.88
P04224 Gm28646-201ENSMUST00000188220 697 ntBASIC9.55□□□□□ -0.88
P04224 Gm28205-201ENSMUST00000189177 697 ntBASIC9.55□□□□□ -0.88
P04224 Gm29032-201ENSMUST00000189797 697 ntBASIC9.55□□□□□ -0.88
P04224 Gm28695-201ENSMUST00000190300 697 ntBASIC9.55□□□□□ -0.88
P04224 Gm37448-201ENSMUST00000192795 697 ntBASIC9.55□□□□□ -0.88
P04224 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC9.55□□□□□ -0.88
P04224 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC9.55□□□□□ -0.88
P04224 Gm44008-201ENSMUST00000204345 412 ntBASIC9.55□□□□□ -0.88
P04224 Gm17812-201ENSMUST00000204935 318 ntBASIC9.55□□□□□ -0.88
P04224 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.55□□□□□ -0.88
P04224 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC9.55□□□□□ -0.88
P04224 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
P04224 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.55□□□□□ -0.88
P04224 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Zbtb34-202ENSMUST00000113158 6602 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
P04224 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Mmgt1-201ENSMUST00000059899 4234 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04224 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
P04224 Gm42826-201ENSMUST00000197548 2639 ntBASIC9.54□□□□□ -0.88
P04224 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
P04224 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
P04224 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
P04224 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.54□□□□□ -0.88
P04224 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
P04224 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.54□□□□□ -0.88
P04224 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC9.54□□□□□ -0.88
P04224 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
P04224 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
P04224 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Gm14381-201ENSMUST00000122105 414 ntBASIC9.54□□□□□ -0.88
P04224 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.54□□□□□ -0.88
P04224 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.54□□□□□ -0.88
P04224 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Mir7085-201ENSMUST00000184353 66 ntBASIC9.54□□□□□ -0.88
P04224 Gm7895-201ENSMUST00000187459 1173 ntBASIC9.54□□□□□ -0.88
P04224 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC9.54□□□□□ -0.88
P04224 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
P04224 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.54□□□□□ -0.88
P04224 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Sh3tc1-207ENSMUST00000201511 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
P04224 Gm44699-201ENSMUST00000208229 5083 ntTSL 5 BASIC9.54□□□□□ -0.88
P04224 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.54□□□□□ -0.88
P04224 Gm43633-201ENSMUST00000202455 2330 ntBASIC9.54□□□□□ -0.88
P04224 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04224 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms