Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cdh17Q9R100 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.61□□□□□ -0.71
Cdh17Q9R100 Gm6677-201ENSMUST00000195100 441 ntBASIC10.61□□□□□ -0.71
Cdh17Q9R100 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.61□□□□□ -0.71
Cdh17Q9R100 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.61□□□□□ -0.71
Cdh17Q9R100 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.61□□□□□ -0.71
Cdh17Q9R100 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.61□□□□□ -0.71
Cdh17Q9R100 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.61□□□□□ -0.71
Cdh17Q9R100 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.61□□□□□ -0.71
Cdh17Q9R100 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdh17Q9R100 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.6□□□□□ -0.71
Cdh17Q9R100 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.6□□□□□ -0.71
Cdh17Q9R100 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Gm15197-201ENSMUST00000120526 478 ntBASIC10.6□□□□□ -0.71
Cdh17Q9R100 Gm15432-201ENSMUST00000121106 195 ntBASIC10.6□□□□□ -0.71
Cdh17Q9R100 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.6□□□□□ -0.71
Cdh17Q9R100 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Gm16165-201ENSMUST00000160140 795 ntBASIC10.6□□□□□ -0.71
Cdh17Q9R100 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Gm43163-201ENSMUST00000196571 442 ntBASIC10.6□□□□□ -0.71
Cdh17Q9R100 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.6□□□□□ -0.71
Cdh17Q9R100 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.6□□□□□ -0.71
Cdh17Q9R100 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.6□□□□□ -0.71
Cdh17Q9R100 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cdh17Q9R100 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cdh17Q9R100 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdh17Q9R100 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdh17Q9R100 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdh17Q9R100 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cdh17Q9R100 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdh17Q9R100 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdh17Q9R100 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdh17Q9R100 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdh17Q9R100 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms