Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smc1aQ9CU62 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smc1aQ9CU62 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smc1aQ9CU62 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smc1aQ9CU62 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smc1aQ9CU62 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smc1aQ9CU62 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.27□□□□□ -0.45
Smc1aQ9CU62 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smc1aQ9CU62 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Rims2-204ENSMUST00000226410 3685 ntBASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Gm13047-201ENSMUST00000117116 815 ntBASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Gm12030-201ENSMUST00000121917 223 ntBASIC12.26□□□□□ -0.45
Smc1aQ9CU62 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Gm7741-201ENSMUST00000181445 989 ntBASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Gm9135-201ENSMUST00000182963 990 ntBASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.26□□□□□ -0.45
Smc1aQ9CU62 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Lect2-202ENSMUST00000225183 823 ntBASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Mir483-201ENSMUST00000093631 73 ntBASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smc1aQ9CU62 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Gm6092-201ENSMUST00000121659 2029 ntBASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Gm14807-201ENSMUST00000116640 983 ntBASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Gm18059-201ENSMUST00000208073 580 ntBASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.25□□□□□ -0.45
Smc1aQ9CU62 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smc1aQ9CU62 Gm8320-201ENSMUST00000177584 1762 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms