Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Gm9625-201ENSMUST00000180422 955 ntBASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 BC080696-201ENSMUST00000202858 1218 ntBASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Gm5449-201ENSMUST00000081132 357 ntBASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhb18Q91Y02 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhb18Q91Y02 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhb18Q91Y02 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhb18Q91Y02 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhb18Q91Y02 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhb18Q91Y02 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhb18Q91Y02 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhb18Q91Y02 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.46□□□□□ -0.58
Pcdhb18Q91Y02 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.46□□□□□ -0.58
Pcdhb18Q91Y02 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhb18Q91Y02 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhb18Q91Y02 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Gm25569-201ENSMUST00000157175 131 ntBASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Mir8091-201ENSMUST00000183602 139 ntBASIC11.45□□□□□ -0.58
Pcdhb18Q91Y02 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms