Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm12795-201ENSMUST00000117594 539 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm15374-201ENSMUST00000119313 844 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm8194-201ENSMUST00000159783 859 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm25072-201ENSMUST00000175233 235 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm23153-201ENSMUST00000175323 313 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm29067-201ENSMUST00000190821 470 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm43058-201ENSMUST00000197645 625 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm42816-201ENSMUST00000198433 325 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm45594-201ENSMUST00000211717 241 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm10020-201ENSMUST00000081993 612 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Gm24992-201ENSMUST00000157412 130 ntBASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Mir7032-201ENSMUST00000185154 79 ntBASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Gm44158-201ENSMUST00000203881 505 ntBASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Mt1-202ENSMUST00000211807 1085 ntBASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdhga4Q91XY4 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms