Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.82□□□□□ -0.68
Pcdh8Q7TSK3 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Gm25562-201ENSMUST00000104608 133 ntBASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Gm11952-201ENSMUST00000121172 821 ntBASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Gm3828-201ENSMUST00000121817 257 ntBASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Gm17214-201ENSMUST00000164501 541 ntBASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Gm18201-201ENSMUST00000174735 875 ntBASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh8Q7TSK3 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gm15620-201ENSMUST00000122949 270 ntBASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gm9372-201ENSMUST00000168454 430 ntBASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gm17070-201ENSMUST00000170463 784 ntBASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Ighv1-2-201ENSMUST00000195325 378 ntBASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms