Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Znf48Q3US17 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm12857-201ENSMUST00000117678 592 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm14724-201ENSMUST00000118400 537 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm12899-201ENSMUST00000120565 551 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm4887-201ENSMUST00000122230 1053 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 4930430E12Rik-201ENSMUST00000139214 901 ntTSL 5 BASIC9.42□□□□□ -0.9
Znf48Q3US17 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm6485-201ENSMUST00000160676 439 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm29588-201ENSMUST00000185738 298 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm28686-201ENSMUST00000187404 609 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm18304-201ENSMUST00000189162 546 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 Sh2d1a-207ENSMUST00000189753 1223 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC9.42□□□□□ -0.9
Znf48Q3US17 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm18382-201ENSMUST00000194394 582 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm42518-201ENSMUST00000196277 938 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm4157-201ENSMUST00000211647 679 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 Krtap13-201ENSMUST00000053149 882 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.42□□□□□ -0.9
Znf48Q3US17 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.42□□□□□ -0.9
Znf48Q3US17 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Znf48Q3US17 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.41□□□□□ -0.9
Znf48Q3US17 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.41□□□□□ -0.9
Znf48Q3US17 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.41□□□□□ -0.9
Znf48Q3US17 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.41□□□□□ -0.9
Znf48Q3US17 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.41□□□□□ -0.9
Znf48Q3US17 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Gm13384-201ENSMUST00000117166 1344 ntBASIC9.41□□□□□ -0.9
Znf48Q3US17 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Znf48Q3US17 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC9.41□□□□□ -0.9
Znf48Q3US17 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC9.41□□□□□ -0.9
Znf48Q3US17 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Znf48Q3US17 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC9.41□□□□□ -0.9
Znf48Q3US17 Gm17046-201ENSMUST00000168078 850 ntBASIC9.41□□□□□ -0.9
Znf48Q3US17 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.41□□□□□ -0.9
Znf48Q3US17 Gm26706-201ENSMUST00000180718 746 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Znf48Q3US17 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.41□□□□□ -0.9
Znf48Q3US17 Gm8869-201ENSMUST00000195222 947 ntBASIC9.41□□□□□ -0.9
Znf48Q3US17 Gm38268-201ENSMUST00000195813 193 ntBASIC9.41□□□□□ -0.9
Znf48Q3US17 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC9.41□□□□□ -0.9
Znf48Q3US17 Gm18290-201ENSMUST00000202900 844 ntBASIC9.41□□□□□ -0.9
Znf48Q3US17 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms