Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 n-R5s154-201ENSMUST00000122513 108 ntBASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Gm20474-201ENSMUST00000180089 596 ntBASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 AC124772.3-201ENSMUST00000222535 575 ntBASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Cacna2d3-208ENSMUST00000225985 918 ntBASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Gm9790-201ENSMUST00000054148 288 ntBASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b2Q3UJB0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Gm12463-201ENSMUST00000118271 849 ntBASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Gm8754-201ENSMUST00000118391 520 ntBASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Gm38114-201ENSMUST00000191877 1232 ntBASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Gm45308-201ENSMUST00000210610 415 ntBASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 AC127583.1-201ENSMUST00000224351 540 ntBASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Gm6713-201ENSMUST00000216137 1446 ntBASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Gm7790-201ENSMUST00000118716 1310 ntBASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b2Q3UJB0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms