Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.15□□□□□ -0.62
Tubgcp3P58854 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Gm17391-201ENSMUST00000171036 126 ntBASIC11.15□□□□□ -0.62
Tubgcp3P58854 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.15□□□□□ -0.62
Tubgcp3P58854 Platr10-202ENSMUST00000191479 818 ntBASIC11.15□□□□□ -0.62
Tubgcp3P58854 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Gm43520-201ENSMUST00000197996 164 ntBASIC11.15□□□□□ -0.62
Tubgcp3P58854 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.15□□□□□ -0.62
Tubgcp3P58854 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.15□□□□□ -0.62
Tubgcp3P58854 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Tubgcp3P58854 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Tubgcp3P58854 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.15□□□□□ -0.62
Tubgcp3P58854 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Tubgcp3P58854 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tubgcp3P58854 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.15□□□□□ -0.63
Tubgcp3P58854 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Tubgcp3P58854 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.15□□□□□ -0.63
Tubgcp3P58854 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.14□□□□□ -0.63
Tubgcp3P58854 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Tubgcp3P58854 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Gm15197-201ENSMUST00000120526 478 ntBASIC11.14□□□□□ -0.63
Tubgcp3P58854 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.14□□□□□ -0.63
Tubgcp3P58854 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Gm27441-201ENSMUST00000185000 105 ntBASIC11.14□□□□□ -0.63
Tubgcp3P58854 Gm7467-201ENSMUST00000185173 652 ntBASIC11.14□□□□□ -0.63
Tubgcp3P58854 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Gm28746-201ENSMUST00000187453 380 ntBASIC11.14□□□□□ -0.63
Tubgcp3P58854 Gm37301-201ENSMUST00000195412 568 ntBASIC11.14□□□□□ -0.63
Tubgcp3P58854 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.14□□□□□ -0.63
Tubgcp3P58854 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.14□□□□□ -0.63
Tubgcp3P58854 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.14□□□□□ -0.63
Tubgcp3P58854 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.14□□□□□ -0.63
Tubgcp3P58854 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.14□□□□□ -0.63
Tubgcp3P58854 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Tubgcp3P58854 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.13□□□□□ -0.63
Tubgcp3P58854 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.13□□□□□ -0.63
Tubgcp3P58854 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.13□□□□□ -0.63
Tubgcp3P58854 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tubgcp3P58854 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.13□□□□□ -0.63
Tubgcp3P58854 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tubgcp3P58854 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tubgcp3P58854 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tubgcp3P58854 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tubgcp3P58854 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tubgcp3P58854 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.13□□□□□ -0.63
Tubgcp3P58854 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tubgcp3P58854 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms