Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC10.78□□□□□ -0.68
Cd9P40240 Gm8531-201ENSMUST00000188319 893 ntBASIC10.78□□□□□ -0.68
Cd9P40240 Gm42710-201ENSMUST00000200608 985 ntBASIC10.78□□□□□ -0.68
Cd9P40240 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.78□□□□□ -0.68
Cd9P40240 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.78□□□□□ -0.68
Cd9P40240 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cd9P40240 Gm45310-201ENSMUST00000210436 275 ntBASIC10.78□□□□□ -0.68
Cd9P40240 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.78□□□□□ -0.68
Cd9P40240 Gm7525-201ENSMUST00000219425 454 ntBASIC10.78□□□□□ -0.68
Cd9P40240 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.78□□□□□ -0.68
Cd9P40240 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.78□□□□□ -0.68
Cd9P40240 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd9P40240 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd9P40240 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd9P40240 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cd9P40240 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd9P40240 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd9P40240 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd9P40240 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.78□□□□□ -0.68
Cd9P40240 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd9P40240 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Cd9P40240 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd9P40240 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cd9P40240 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cd9P40240 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd9P40240 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.78□□□□□ -0.68
Cd9P40240 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cd9P40240 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cd9P40240 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cd9P40240 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.78□□□□□ -0.68
Cd9P40240 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.77□□□□□ -0.68
Cd9P40240 AC153524.2-202ENSMUST00000220401 1794 ntBASIC10.77□□□□□ -0.68
Cd9P40240 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd9P40240 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cd9P40240 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd9P40240 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cd9P40240 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.77□□□□□ -0.68
Cd9P40240 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Cd9P40240 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cd9P40240 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Cd9P40240 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.77□□□□□ -0.69
Cd9P40240 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.77□□□□□ -0.69
Cd9P40240 Gm19459-201ENSMUST00000176240 835 ntBASIC10.77□□□□□ -0.69
Cd9P40240 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.77□□□□□ -0.69
Cd9P40240 Gm18014-201ENSMUST00000183369 817 ntBASIC10.77□□□□□ -0.69
Cd9P40240 Gm18827-201ENSMUST00000188341 790 ntBASIC10.77□□□□□ -0.69
Cd9P40240 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.77□□□□□ -0.69
Cd9P40240 Gm18753-201ENSMUST00000201000 566 ntBASIC10.77□□□□□ -0.69
Cd9P40240 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.77□□□□□ -0.69
Cd9P40240 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.77□□□□□ -0.69
Cd9P40240 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.77□□□□□ -0.69
Cd9P40240 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.77□□□□□ -0.69
Cd9P40240 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cd9P40240 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Cd9P40240 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.77□□□□□ -0.69
Cd9P40240 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Cd9P40240 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cd9P40240 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cd9P40240 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.77□□□□□ -0.69
Cd9P40240 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.76□□□□□ -0.69
Cd9P40240 Gm42833-201ENSMUST00000196019 2124 ntBASIC10.76□□□□□ -0.69
Cd9P40240 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.76□□□□□ -0.69
Cd9P40240 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.76□□□□□ -0.69
Cd9P40240 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cd9P40240 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd9P40240 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Cd9P40240 Gm11411-201ENSMUST00000117951 719 ntBASIC10.76□□□□□ -0.69
Cd9P40240 Gm13117-201ENSMUST00000120894 691 ntBASIC10.76□□□□□ -0.69
Cd9P40240 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd9P40240 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms