Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.27□□□□□ -0.61
Nfkb1P25799 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.27□□□□□ -0.61
Nfkb1P25799 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nfkb1P25799 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.27□□□□□ -0.61
Nfkb1P25799 Gm12453-201ENSMUST00000121981 331 ntBASIC11.27□□□□□ -0.61
Nfkb1P25799 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 Gm20414-201ENSMUST00000172918 646 ntBASIC11.27□□□□□ -0.61
Nfkb1P25799 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.27□□□□□ -0.61
Nfkb1P25799 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.27□□□□□ -0.61
Nfkb1P25799 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.27□□□□□ -0.61
Nfkb1P25799 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.27□□□□□ -0.61
Nfkb1P25799 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nfkb1P25799 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Nfkb1P25799 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Nfkb1P25799 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.27□□□□□ -0.61
Nfkb1P25799 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nfkb1P25799 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.26□□□□□ -0.61
Nfkb1P25799 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.26□□□□□ -0.61
Nfkb1P25799 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Nfkb1P25799 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nfkb1P25799 Gm11996-201ENSMUST00000117538 915 ntBASIC11.26□□□□□ -0.61
Nfkb1P25799 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nfkb1P25799 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Gm24328-201ENSMUST00000175104 67 ntBASIC11.26□□□□□ -0.61
Nfkb1P25799 Gm26272-201ENSMUST00000179241 132 ntBASIC11.26□□□□□ -0.61
Nfkb1P25799 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.26□□□□□ -0.61
Nfkb1P25799 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.26□□□□□ -0.61
Nfkb1P25799 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Nfkb1P25799 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.26□□□□□ -0.61
Nfkb1P25799 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.26□□□□□ -0.61
Nfkb1P25799 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nfkb1P25799 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Nfkb1P25799 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.26□□□□□ -0.61
Nfkb1P25799 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nfkb1P25799 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.26□□□□□ -0.61
Nfkb1P25799 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nfkb1P25799 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.25□□□□□ -0.61
Nfkb1P25799 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Gm22937-201ENSMUST00000103954 131 ntBASIC11.25□□□□□ -0.61
Nfkb1P25799 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Gm12106-201ENSMUST00000116006 1200 ntBASIC11.25□□□□□ -0.61
Nfkb1P25799 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nfkb1P25799 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.25□□□□□ -0.61
Nfkb1P25799 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms