Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gm15808-201ENSMUST00000119046 604 ntBASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gm6108-201ENSMUST00000208365 367 ntBASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gm8913-201ENSMUST00000209491 641 ntBASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gm45575-201ENSMUST00000210283 548 ntBASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trim13Q9CYB0 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Snord17-201ENSMUST00000104526 238 ntBASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Gm13996-201ENSMUST00000118456 430 ntBASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Gm16505-201ENSMUST00000179981 232 ntBASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Gm37666-201ENSMUST00000194110 866 ntBASIC10.12□□□□□ -0.79
Trim13Q9CYB0 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC10.12□□□□□ -0.79
Trim13Q9CYB0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Gm45574-201ENSMUST00000210921 331 ntBASIC10.12□□□□□ -0.79
Trim13Q9CYB0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim13Q9CYB0 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gm13615-201ENSMUST00000120242 1612 ntBASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gm23949-201ENSMUST00000104027 127 ntBASIC10.11□□□□□ -0.79
Trim13Q9CYB0 Gm14724-201ENSMUST00000118400 537 ntBASIC10.11□□□□□ -0.79
Trim13Q9CYB0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms